I recently had my stock alternator rebuilt/rewound to 120A output (it tested at 150A) by Boyle Future Technology in Auburn CA. They did a great job, turned around normally in about a week. When mine didn't initially test well enough, they got a new batch of parts (rotor or stator) and did it again, so it took a little longer. Great service and it cost $201 shipped back to me. Highly recommended. I think they specialize in Toyota, but it's worth a call. No issues with fitting an aftermarket alternator, since they use your stock case.
530-888-6290