Cool!
As you already know, I am sure, those things have remarkably little flex in the frame, that means you have a lot more flexibility in the design of the camper. Obviously you still need to allow for some flex, but not too much really. There were some really good ideas for you in Jay Shapiro's build thread.
Perhaps, and this is my opinion, so I hope you will forgive me, but you have not had it mentioned so far; I have heard multiple times that the sliders tend to be very much a weak point for the off road RV market. You potentially can find the entire thing falling apart around that. Then again the sky could fall too, soo... Just saying that you may want to consider that area very carefully before you do it, and if you do it make sure you build it in a way that will be strong for you.
You are right to make the slider a manual, or at least a manual back up. It is generally unwise to have a reliance on mechanical things controlling that stuff on an off road vehicle. Besides you never want mechanicals to control you bed by themselves. If you cannot, for instance, raise a roof and the bed is mushed to the ceiling when the roof is down...
On the rocks in the duels. I drove a dump truck right out of college, always in the rocks and dirt roads, I mean it was construction sights, they were everywhere. I believe that I Had twice, perhaps three times gotten rocks in there, and once I got a big chunk of ice. All you really need to do to get one out is have a nice chain with hooks on the end along with you. Wrap the chain around the rock, hook the hook back onto the chain. Stick the other end of the chain behind the front tire, and start backing up. Pop that sucker right out of there no big deal. I HAVE seen guys put a hole in their sidewalls, but it is hard to do (IMHO) You have to be rather hard on the truck in the first place, driving it like a crazy and the tires are the least of your problems anyhow.
On the John, I really like the ones that allow you to drain the liquid onto the tail pipe when you are driving down the road. It evaporates everything for you, does not make a mess, and it does not require you to keep in the hold for very long either.
Anyhow... It looks like a GREAT rig idea. I would love to come up and see it some time, if you would be willing to let me. Ever need a spare hand on a wrench let me know. I am just down the hill in Happy Valley. The 15K LBS sounds like a great deal there, for what you are doing. What a nice looking rig, can't wait!
Cheers, and I look forward to your build!
Brian