You could possibly try some Surco Crossbars:
http://www.surcoinc.com/Roof/Crossbars/Safari_Crossbars.html
And their channel adapters:
http://www.surcoinc.com/Roof/Mounting_Accessories/Channel_Adapters.html
All this would run you around $175 or so (check Amazon for prices). I'm guessing the channel adapters would work in the Yakima rails, but you'd have to check (I'm going on the assumption the rails you're talking about are the flat rails with a groove down the center). And I don't know the weight limits for the Surco channel adapters.
And if your truck's topper is perfectly flat, you could get two sets of the channel adapters (eight total) and have four crossbars under your RTT. That would run you about $130 (plus the cost of some square or rectangle tubing to use as crossbars).
On those Surco channel adapters, you could probably just bolt some square/rectangle tubing to the tops of them, or some strong channel.
All these mounts do, is take the square pieces of metal (with a threaded hole in the center) that slide in the groove of the track, and the adapters bolt onto them via the threaded holes. And then the crossbar mounts on top (see picture below). You could use this concept to fabricate your own crossbar mounts. Get a 16" section of steel strap narrow enough to slide through the rails (and just tall enough to fit in the groove, cut them to 4" in length, drill and tap two 1/4 or 5/16" holes at either end, and make a mount similar to what's linked to above in the picture, and connect the two sides with square/rectangle/or channel.
![Surco CH100.1.JPG Surco CH100.1.JPG](https://expeditionportal.com/forum/data/attachments/309/309936-c1a1acbcfc25a81f7a5db4db5dd45913.jpg)