Going to HydroBoost is a different kettle of fish. The considerable increase in booster power means that you can use a m/c with a large bore (for a small pedal travel distance) and still generate the necessary line pressures at reasonable pedal effort. A vacuum booster simply can't match the HB's performance.
The thing to keep in mind is that as good as an HB system can be, it won't over-come brake fade. If you are fading the brakes you are getting the pads, calipers, and most importantly the fluid hot enough to boil. If you can't drive slower, the only cure there is more airflow thru the rotor. I'd suggest the 62 dust shields as a starting place. You want to encourage air to flow into the center of the rotor at the wheel bearings (help keep them cool too) - not to either or both outer surfaces.
If you have boiled the fluid it is time to flush the system.
If a slotted rotor appears to help with the 'fading' then what is really happening is that the pads are over-heating and generating a gas between they and the surface of the rotor. With modern pad compounds this has become less common, but it is still possible. The slots provide a route for the gas to escape. Holes would too, but don't go there if rotor life span is important to you.