Can you elaborate on how you think the integrated roof rack mounts "partially resolve the issue of a roof rack"? I've had the same feature on the LJ Safari Cab since the beginning, and I've carted lots of stuff up there, including a roof-top tent, and I've never felt like there was some issue it didn't resolve. If I know more about what the issue is that you see in the design maybe I can alter the design to eliminate whatever the issue is.
Sure thing. I like it when people ask for my opinions - they usually don't want them LOL!
First off, other than perhaps the MBRP rack (which would still take some work if one wanted the front addition, and to deal with the side windows), due to the extra height of the roof, the design likely eliminates almost every rack that's been made for a stock JK. Sure with some work and customization I'm sure someone could get one to work... but unless they can do it themselves, it likely wouldn't be cheap.
As for how your design only partially solves that issue. While it works for the style of RTT you have on it (basically the same as my old Tepui), I'm highly skeptical that it would work with my James Baroud clam shell type RTT due to the placement/limitation of the first load bar. Good news is that most of the weight (on mine - JB Escape) is in the middle and at the back, so maybe it might work... but I still think it would look odd with 2' of overhang (from the front loadbar) on the front. Additionally - and while I can't be 100% certain due to not having seen your LJ rack, but if it's anything like the one AEV came out with, it's unlikely that it's setup to have the hard top on/off multiple times like a Gobi/MBRP/etc would allow for. Lastly... due to the curve of the roof, having a full length rack/basket would likely require a new front load bar (say something like a KMA custom light bar setup). And then would still look somewhat silly and at odds with the roof design itself.
So yeah... for me it would partially resolve the roof rack issue. It would likely allow me to pack lumbar and my kayak without major issues (especially the kayak). It would allow me to put a bike, awning, or one of those enclosed cargo carriers up there, or a small basket like what you've depicted. But I'd be pretty hesitant about getting something like this with the idea of mounting my JB RTT to it. Or if I was someone that swapped my HT on/off multiple times during the summer, or felt I might want/need a full sized basket.