This is the primary drive train, not a low volume option. There really is no excuse for a brand new mass produced truck that stickers at 70g at its cheapest, to have a huge hump in the footwell. It was an oversight. Was it due to a skeleton staff of designers on a budget? Was it due to organizational issues with differing mangers not talking? Was it due to upper management interference?
My vote would go to either deciding on a drive train too late for proper fitting, or someone failed to look for interference, and the floor pan bump was the quickest fix to keep a schedule as it is an in house alteration, didn't involve outside suppliers (speed, not money).
And it's not the only OOPS that looks a lot like, "this is my first car, and I didn't think of that". Does it matter to many buyers? No, but the fact we are discussing means it actually IS an issue. It's real. It's not something new car buyers ever see in their spendy new purchase.