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As I understand and correct me if I am wrong:
I have a heat / cold rear unit but he works only with the engine on.
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On the top there are two fans, quite powerful, that sucks the air thru the radiator which is
chilled / heated by the main AC unit
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Correct, the rear heat and A/C units are extensions of the vehicle system, which is powered by radiator hot water and the A/C compressor mounted on the engine. The top unit in the back of the module (patient compartment) is generally the A/C evaporator coils and the squirrel cage blower fan. The unit near the very bottom is generally the heater radiator coils and its own blower fan (mine is like this but yours may be different). If you only have one unit, then the A/C and Heater coils are housed in the same unit. The heater hoses are just like the ones under your hood with hose clamps, and the A/C hoses are high pressure ones with swedged on fittings. Do Not Cut either of these unless you know exactly what you're doing, especially the A/C hoses. Pic. #1 above is the blower fan, pic. #2 looks like the A/C evaporator coils.
No, this is not the thermostat. That is usually located over on the 'Action Wall' which is where the rear electrical switch panel and the attendant's seat is. It will probably look like an older style mechanical home unit. This picture looks to be the fan speed control, which is wired from the electrical switch panel on the 'Action Wall'.
I thought if I could remove the radiator but keep the fan (rewired) it would be perfect.
The fan will operate without the heater core, but it may also have a temperature sensor that will limit the fan to either high or low speed. I assume you just want to use the fan for circulation correct? If so, you can test this by turning on the fan without the engine running or the Heat or A/C operating. If it runs, you're probably OK. If there is a sensor(s) and you remove it, the fan may stop working. If that is the case, then you will need to bypass the sensor and connect the two wires together, and then test it again. Also, the fan motor is a fairly heavy duty one and may draw good amount of current when it's running. It is probably more that you will want when you are operating just off of your house batteries.
With all of that being said, there is no way I would tear out the rear heat and air system if it was working fine, which it sounds like it is. I understand the need for A/C when you're camping, because I'm in the same situation living in Florida. I could care less if I put heat in there, but I've got to have my A/C! I know space is at a premium in these units, but I would try to install a portable A/C unit around the installed one if at all possible. Think about your resale value also. There is a kit you can get to convert the installed A/C to make it run off of 120VAC, but it is very expensive and very involved to install.
I'm sorry if I sound like I'm preaching to you, but I just hate to see you do something you may regret later on, just because you didn't know. I, like a lot of others, have spent a year or more researching and planning out our builds before we ever picked up the first screwdriver. When you mess up something on one of these, you can't just run down to Pep Boy's and buy another one.